celer.GroupLassoCV

class celer.GroupLassoCV(groups=None, eps=0.001, n_alphas=100, alphas=None, fit_intercept=True, max_iter=100, tol=0.0001, cv=None, verbose=0, max_epochs=50000, p0=10, prune=True, precompute='auto', positive=False, n_jobs=None)

GroupLassoCV scikit-learn estimator based on Celer solver

The best model is selected by cross-validation.

The optimization objective for the Group Lasso is:

(1 / (2 * n_samples)) * ||y - X w||^2_2 + alpha * \sum_g ||w_g||_2

where w_g is the weight vector of group number g.

Parameters:

groupsint | list of ints | list of lists of ints.

Partition of features used in the penalty on w. If an int is passed, groups are contiguous blocks of features, of size groups. If a list of ints is passed, groups are assumed to be contiguous, group number g being of size groups[g]. If a list of lists of ints is passed, groups[g] contains the feature indices of the group number g.

epsfloat, optional

Length of the path. eps=1e-3 means that alpha_min / alpha_max = 1e-3.

n_alphasint, optional

Number of alphas along the regularization path.

alphasnumpy array, optional

List of alphas where to compute the models. If None alphas are set automatically

fit_interceptboolean, default True

whether to calculate the intercept for this model. If set to false, no intercept will be used in calculations (e.g. data is expected to be already centered).

max_iterint, optional

The maximum number of iterations (subproblem definitions).

tolfloat, optional

Stopping criterion for the optimization: the solver runs until the duality gap is smaller than tol * norm(y) ** 2 / len(y) or the maximum number of iteration is reached.

cvint, cross-validation generator or an iterable, optional

Determines the cross-validation splitting strategy. Possible inputs for cv are: - None, to use the default 3-fold cross-validation, - integer, to specify the number of folds. - An object to be used as a cross-validation generator. - An iterable yielding train/test splits. For integer/None inputs, sklearn KFold is used.

verbosebool or integer

Amount of verbosity.

max_epochsint, optional (default=50000)

Maximum number of coordinate descent epochs when solving a subproblem.

p0int, optional (default=10)

Number of features in the first working set.

prunebool, optional (default=True)

Whether to use pruning when growing the working sets.

precomputeignored parameter, kept for sklearn compatibility.

positivebool, optional (default=False)

When set to True, forces the coefficients to be positive.

n_jobsint or None, optional (default=None)

Number of CPUs to use during the cross validation. None means 1 unless in a joblib.parallel_backend context. -1 means using all processors.

See also

celer_path

GroupLasso

Attributes:

alpha_float

The amount of penalization chosen by cross validation

coef_array, shape (n_features,)

parameter vector (w in the cost function formula)

intercept_float

independent term in decision function.

mse_path_array, shape (n_alphas, n_folds)

mean square error for the test set on each fold, varying alpha

alphas_numpy array, shape (n_alphas,)

The grid of alphas used for fitting

dual_gap_ndarray, shape ()

The dual gap at the end of the optimization for the optimal alpha (alpha_).

n_iter_int

number of iterations run by the coordinate descent solver to reach the specified tolerance for the optimal alpha.

__init__(groups=None, eps=0.001, n_alphas=100, alphas=None, fit_intercept=True, max_iter=100, tol=0.0001, cv=None, verbose=0, max_epochs=50000, p0=10, prune=True, precompute='auto', positive=False, n_jobs=None)

Methods

__init__([groups, eps, n_alphas, alphas, ...])
fit(X, y[, sample_weight])	Fit linear model with coordinate descent.
get_metadata_routing()	Get metadata routing of this object.
get_params([deep])	Get parameters for this estimator.
path(X, y, alphas[, coef_init])	Compute GroupLasso path with Celer.
predict(X)	Predict using the linear model.
score(X, y[, sample_weight])	Return the coefficient of determination of the prediction.
set_fit_request(*[, sample_weight])	Request metadata passed to the fit method.
set_params(**params)	Set the parameters of this estimator.
set_score_request(*[, sample_weight])	Request metadata passed to the score method.